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Puplication List KFSP BacVivo (PDF, 112 KB)
Fourier-transform faecium: performance analysis and outbreak investigation
T. C, Scheier, J. Franz, M. Boumasmoud, F. Andreoni, B. Chakrakodi, B. Duvnjak, A. Egli, W. Zingg, A. Ramette, A. Wolfensberger, R. D. Kouyos, S. D. Brugger Microbiol Spectr. 2023 Sep 22;e0098423. doi: 10.1128/spectrum.00984-23. Online ahead of print (PDF, 614 KB)
Limited Adaptation of Staphylococcus aureus during Transition from Colonization to Invasive Infection
Anna K. Räz, Federica Andreoni, Mathilde Boumasmoud, Judith Bergada-Pijuan, Tiziano A. Schweizer Srikanth Mairpady Shambat, Barbara Hasse, Annelies S. Zinkernagel, Silvio D. Brugger. Microbiol Spectr. 2023 June 21, doi: 10.1128/spectrum.02590-21
Serine-threonine phosphoregulation by PknB and Stp contributes to quiescence and antibiotic tolerance in Staphylococcus aureus
Huemer M, Mairpady Shambat S, Hertegonne S, Bergada-Pijuan J, Chang Ch, Pereira S, Gómez-Mejia A, Van Gestel L, Bär J, Vulin C, Pfammatter S, Stinear TP, Monk IR, Dworkin J, Zinkernagel AS.
Sci Signal 2023 Jan 3;16(766):eabj8194. doi: 10.1126/scisignal.abj8194. Epub 2023 Jan 3.
Rapid Antimicrobial Susceptibility Testing in Patients with Bacteremia due to Enterobacterales: Impact in Clinical Routine
Reiber C*, Bodendoerfer E*, Brugger SD, Eberhard N, Hitz E, Hofmaenner D, Herren S, Kolsenik-Goldmann N, Manicini S, Röthlin K, Zbinden R, Zinkernagel AS, Hasse B.
Swiss Med Wkly. 2023 accepted
Rapid detection of Staphylococcus aureus and Streptococcus pneumoniae by real-time analysis of volatile metabolites
Gómez-Mejia A, Arnold K, Bär J, Singh KD, Scheier TC, Brugger SD, Zinkernagel AS, Sinues P.
iScience 2022 Sep 6;25(10):105080
Antibiotic prophylaxis before dental procedures to prevent infective endocarditis: a systematic review.
Bergadà-Pijuan J*, Frank M*, Boroumand S*, Hovaguimian F, Mestres CA, Bauernschmitt R, Carrel TP, Ruschitzka F, Zinkernagel AS, Kouyos RD, Hasse B.
Infection 2023 Feb;51(1):47-59
A retrospective analysis of blood culture-negative endocarditis at a tertiary care center in Switzerland.
Daehler R, Brugger SD, Frank M, Greutmann M, Sromicki J, Marques-Maggio E, Imkamp F, Bauernschmitt R, Carrel TP, Zinkernagel AS, Hasse B.
Swiss Med Wkly. 2022 Dec 10;152:40012
Intervertebral disc cell chondroptosis elicits neutrophil response in Staphylococcus aureus spondylodiscitis
Schweizer TA, Andreoni F, Acevedo C, Scheier TC, Heggli I, Marques Maggio E, Eberhard N, Brugger SD, Dudli S, Zinkernagel AS.
Front Immunol 2022 Jul 28;13:908211. doi: 10.3389/fimmu.2022.908211. eCollection 2022.
Imaging Characteristics and Diagnostic Accuracy of FDG-PET/CT, Contrast Enhanced CT and Combined Imaging in Patients with Suspected Mycotic or Inflammatory Abdominal Aortic Aneurysms.
Husmann L, Huellner MW, Gruenig H, Ledergerber B, Messerli M, Mestres CA, Rancic Z, Hasse B, and the Vasgra Cohort*,
PLoS One. 2022 Aug 9;17(8):e0272772
Genomic Surveillance of Vancomycin-Resistant Enterococcus faecium Reveals Spread of a Linear Plasmid Conferring a Nutrient Utilization Advantage
Boumasmoud M, Dengler Haunreiter V, Schweizer TA, Meyer L, Chakrakodi B, Schreiber PW, Seidl K, Kühnert D, Kouyos R, Zinkernagel AS.
Annual report 2022 Page 10 mBio 2022 Apr 26;13(2):e0377121. doi: 10.1128/mbio.03771-21. Epub 2022 Mar 28.
The importance of intravenous immunoglobulin treatment in critically ill patients with necrotizing soft tissue infection: a retrospective cohort study
Hofmaenner DA, Wendel Garcia PD, Blum MR, David S, Schuepbach RA, Buehler PK, Frey PM, Zinkernagel AS, Silvio D Brugger SD.
BMC Infect Dis 2022 Feb 21;22(1):168.doi: 10.1186/s12879-022-07135-6.
Quantification of within-patient Staphylococcus aureus phenotypic heterogeneity as a proxy for the presence of persisters across clinical presentations
Julian Bär, Mathilde Boumasmoud, Srikanth Mairpady Shambat, Clément Vulin, Markus Huemer, Tiziano A. Schweizer, Alejandro Gómez-Mejia, Nadia Eberhard, Yvonne Achermann, Patrick O. Zingg, Carlos A. Mestres, Silvio D. Brugger, Reto A. Schuepbach, Roger D. Kouyos, Barbara Hasse, Annelies S. Zinkernagel
Open Article Quantification of within-patient Staphylococcus aureus phenotypic heterogeneity as a proxy for the presence of persisters across clinical presentations - Feb 2022 (PDF, 2 MB)
Assessing antibiotic tolerance of Staphylococcus aureus derived directly from patients by the Replica Plating Tolerance Isolation System- REPTIS.
Herren S, Huemer M, Acevedo C, Gómez Mejia A, Andreoni F, Mairpady Shambat S, Hasse B, Zbinden R, Brugger S, Zinkernagel A.
DOI: 10.1128/AAC.00967-21 - Jan. 2022
Polyester Vascular Graft Material and Risk for Intracavitary Thoracic Vascular Graft Infection.
Schweizer TA, Mairpady Shambat S, Dengler Haunreiter V, Mestres CA, Weber A, Maisano F, Zinkernagel AS*, Hasse B* (2020)
Emerg Inf Dis, in press, July 2020
Open Article - Emerg. Invec. Dis. - Polyester Vascular Graft Material - Oct. 2020 (PDF, 885 KB)
Clinical Management in Patients with suspected Mycotic Aneurysms: Impact of FDG-PET/CT.
Husmann L, Huellner MW, Gruenig H, Eberhard N, Mestres CA, Rancic Z, Hasse B, and the Vasgra Cohort.
Open Article - Clinical Management in Patients with suspected Mycotic Aneurysms: Impact of FDG-PET/CT - Oct 2021 (PDF, 1 MB)
Impact of Unknown Incidental Findings in PET/CT examinations of Patients with Proven or Suspected Vascular Graft Infections
Husmann L, Eberhard N, Huellner MW, Ledergerber B, Mueller A, Gruenig H, Messerli M, Mestres CA, Rancic Z, Hasse B, and the VASGRA Cohort.
Open Article - Impact of Unknown Incidental Findings in PET//CT examinations of Patients with Proven or Suspected Vascular Graft Infections - Jul 2021 (PDF, 1 MB)
Validation of the Management of Aortic Graft Infection Collaboration (MAGIC) criteria for the diagnosis of vascular graft/endograft infection: results from the prospective Vascular Graft Cohort Study.
Anagnostopoulos A, Mayer F, Ledergerber B, Bergadà-Pijuan J, Husmann L, Mestres CA, Rancic Z, Hasse B, and the VASGRA Cohort Study.
Open Article - Validation of the Management of Aortic Graft Infection Collaboration (Magic) criteria for the diagnosis of vascular graft/endograft infecton: results from the prospective Vascular Graft Cohort Study - June 2021 (PDF, 230 KB)
Bacterial pulmonary superinfections are associated with longer duration of ventilation in critically ill COVID-19 patients.
Buehler PK, Zinkernagel AS, Hofmaenner DA, Wendel Garcia PD, Acevedo CT, Gomez-Mejia A, Mairpady Shambat S, Andreoni F, Maibach MA, Bartussek J, Hilty MP, Frey PM, Schuepbach RA, Brugger SD. (2021)
Open Article - Cell Reports Medicine - Bacterial pulmonary superinfections are associated with longer duration of ventilation in critically ill COVID-19 patients. - April 2021 (PDF, 1 MB)
Open wounds and rifampicin therapy are associated with rifampicin resistance among staphylococcal vascular graft/endograft infections.
Leung YKS, Ledergerber B, Eberhard N, Mestres CA, Rancic Z, Zimmermann A, Zbinden R, Brugger SD, Zinkernagel AS, Hasse B, on behalf of the Vasgra cohort study. (2021)
Open Article - JAC-Antimicrobial resistance - Open wounds and rifampicin therapy are associated with rifampicin resistance among staphylococcal vascular graft/endograft infections. - March 2021 (PDF, 434 KB)
Antimicrobial susceptibility patterns of respiratory Gram-negative bacterial isolates from COVID-19 patients in Switzerland.
Gysin M*, Acevedo CT*, Klara Haldimann*, Bodendoerfer E, Imkamp F, Bulut K, Buehler PK, Brugger SD, Becker K*, Hobbie SN*. (2021)
Open Article - medRxiv - Antimicrobial susceptibility patterns of respiratory Gram-negative bacterial isolates from COVID-19 patients in Switzerland. - March 2021 (PDF, 1 MB)
PET/CT in Therapy Control of Mycotic Aortic Aneurysms.
Husmann L, Huellner MW, Eberhard N, Ledergerber B, Kaelin MB, Anagnostopoulos A, Kudura K, Burger IA, Mestres CA, Rancic Z, Hasse B, and the VASGRA Cohort. (2021)
Open Article - Sci Rep - PET/CT in Therapy Control of Mycotic Aortic Aneurysms. - March 2021 (PDF, 1 MB)
Cutibacterium avidum resists surgical skin antisepsis in the groin - a potential risk factor for periprosthetic joint infection: a quality control study.
Maurer SM, Kursawe L, Rahm S, Prinz J, Zinkernagel AS; Moter A, Kuster SP, Zbinden R, Zingg PO and Achermann Y. (2021)
Open Article - Antimicrob Resist Infect Control - Cutibacterium avidum resists surgical skin antisepsis in the groin - a potential risk factor for periprosthetic joint infection: a quality control study. (PDF, 1 MB)
Quantifying variation in bacterial reproductive fitness: a high-throughput method.
Frey PM, Baer J, Bergadà Pijuan J, Lawless C, Bühler PK, Kouyos RD, Lemon KP, Zinkernagel AS, Brugger SD. (2021)
Open Article - mSystems - Quantifying variation in bacterial reproductive fitness: a high-throughput method. January/ February 2021 (PDF, 1 MB)
Molecular reprogramming and phenotype switching in Staphylococcus aureuslead to hith antibioticpersistence and affect therapy success
Markus Huemer, Srikanth Mairpady Shambat, Judith Bergada-Pijuan, Sandra Söerholm, Mathilde Boumasmoud, Clément Vulin, Alejandro Gómez-Mejia, Minia Antelo Varela, Vishwachi Tripathi, Sandra Götschi, Ewerton Marques Maggio, Barbara Hasse, Silvio D. Brugger, Dirk Bumann, Reto A. Schuepbach, Annelies S. Zinkernagel (2021)
Open Article - PNAS.org - Molecular reprogramming and phenotype switching in Staphylococcus aureus - February 2021 (PDF, 2 MB)
Diagnostic Accuracy of 18F-FDG-PET/CT and contrast-enhanced CT in Patients with Suspected Infected Arterial Aneurysms
Husmann L, Huellner MW, Ledergerber B, Eberhard N, Kälin MB, Anagnostopoulos A, Kedura K, Burger IA, Mestres CA, Rancic Z, Hasse B and the Vasgra Cohort (2020)
Open Article - Diagnostic Accuracy of PET/CT - June 2020 (PDF, 972 KB)
In-host evolution of Staphylococcus epidermidis in a pacemaker-associated endocarditis resulting in increased antibiotic tolerance
Vanina Dengler Haunreiter, Mathilde Boumasmoud, Nicola Häffner, Dennis Wipfli, Nadja Leimer, Carole Rachmühl, Denise Kühnert, Yvonne Achermann, Reinhard Zbinden, Stefano Benussi, Clement Vulin & Annelies S. Zinkernagel
Open Article - nature COMMUNICATIONS - February 2019 (PDF, 3 MB)
